STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRIP2Nuclear receptor interacting protein 2. (164 aa)    
Predicted Functional Partners:
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
   
 
 0.751
RPS27A
Ribosomal protein S27a.
   
 
 0.712
ZFAND4
Zinc finger AN1-type containing 4.
   
 
 0.649
OASL
2'-5'-oligoadenylate synthase 1-like.
   
 
 0.644
LOC106900028
polyubiquitin-B.
   
 
 0.644
ENSCPUP00000011075
annotation not available
   
   0.587
UBL7
Ubiquitin like 7.
   
 
 0.578
UBQLN1
Ubiquilin 1.
   
 
 0.578
UBQLN4
Ubiquilin 4.
   
 
 0.578
PSMD4
Proteasome 26S subunit, non-ATPase 4.
   
 
 0.558
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.