STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP8Rho GTPase activating protein 8. (403 aa)    
Predicted Functional Partners:
RICTOR
RPTOR independent companion of MTOR complex 2.
   
 
  0.704
PRR5
Proline rich 5.
 
   
 0.644
ARHGAP1
Rho GTPase activating protein 1.
  
 
0.520
EXOC8
Exocyst complex component 8.
    
  0.488
EXOC7
Exocyst complex component 7.
     
 0.461
RHOA
Ras homolog family member A.
    
  0.429
RHOB
Rho-related GTP-binding protein RhoB.
    
  0.429
RHOC
Ras homolog family member C.
    
  0.429
PHOSPHO2
Phosphatase, orphan 2.
     
 0.408
PHOSPHO1
Phosphoethanolamine/phosphocholine phosphatase 1.
     
 0.408
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.