STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPGS1Tubulin polyglutamylase complex subunit 1. (352 aa)    
Predicted Functional Partners:
LRRC49
Leucine rich repeat containing 49.
    
 0.888
NICN1
Nicolin 1.
    
 0.871
TTLL1
Tubulin tyrosine ligase like 1.
    
 0.862
TPGS2
Tubulin polyglutamylase complex subunit 2.
    
 0.777
TTL
Tubulin tyrosine ligase.
    
 0.716
CATIP
Ciliogenesis associated TTC17 interacting protein.
      
 0.610
TTC13
Tetratricopeptide repeat domain 13.
      
 0.610
TTLL5
Tubulin tyrosine ligase like 5.
    
 0.592
TTLL10
Tubulin tyrosine ligase like 10.
    
 0.568
TTLL2
Tubulin tyrosine ligase like 2.
    
 0.560
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.