STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP27Rho GTPase activating protein 27. (535 aa)    
Predicted Functional Partners:
MYO9A
Myosin IXA.
    
0.705
MYO9B
Myosin IXB.
    
0.705
RHOV
Ras homolog family member V.
   
 0.635
BCR
BCR activator of RhoGEF and GTPase.
   
0.593
ABR
ABR activator of RhoGEF and GTPase.
   
0.593
CDC42
Cell division cycle 42.
   
 0.589
LOC106894005
Ras-related C3 botulinum toxin substrate 3.
   
 0.584
LOC106893988
Ras-related C3 botulinum toxin substrate 3.
   
 0.584
RAC2
Rac family small GTPase 2.
   
 0.584
RAC1
Rac family small GTPase 1.
   
 0.584
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.