STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBC1D31TBC1 domain family member 31. (1080 aa)    
Predicted Functional Partners:
NOL10
Nucleolar protein 10.
     
 0.969
ENSCPUP00000006684
annotation not available
     
 0.967
LOC106897508
Intersectin-2-like.
     
 0.967
UTP25
UTP25 small subunit processor component.
    
 0.930
WDR36
WD repeat domain 36.
     
 0.924
CEP152
Centrosomal protein 152.
   
 
 0.922
BOP1
BOP1 ribosomal biogenesis factor.
   
 
 0.916
KRR1
KRR1 small subunit processome component homolog.
     
 0.911
LOC106891181
Uromodulin-like.
     
 0.911
NDEL1
nudE neurodevelopment protein 1 like 1.
    
 0.875
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.