STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANP32EAcidic nuclear phosphoprotein 32 family member E. (317 aa)    
Predicted Functional Partners:
RUVBL1
RuvB like AAA ATPase 1.
    
 0.840
SET
SET nuclear proto-oncogene.
   
 0.818
EP400
E1A-binding protein p400-like.
    
 0.817
BRD8
Bromodomain containing 8.
    
 0.808
INO80
INO80 complex ATPase subunit.
    
  0.807
INO80C
INO80 complex subunit C.
     
 0.799
ACTL6A
Actin like 6A.
   
  0.798
RUVBL2
ruvB-like 2.
    
  0.793
ING3
Inhibitor of growth family member 3.
    
  0.793
UCHL5
Ubiquitin C-terminal hydrolase L5.
    
  0.773
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.