STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARAP2ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2. (1600 aa)    
Predicted Functional Partners:
ASAP3
ArfGAP with SH3 domain, ankyrin repeat and PH domain 3.
   
0.761
RAP1B
RAP1B, member of RAS oncogene family.
    
 0.739
RAP1A
RAP1A, member of RAS oncogene family.
    
 0.739
SMAP2
Small ArfGAP2.
     
0.738
ACAP3
ArfGAP with coiled-coil, ankyrin repeat and PH domains 3.
   
 
0.709
ACAP2
ArfGAP with coiled-coil, ankyrin repeat and PH domains 2.
   
 
0.709
SMAP1
Small ArfGAP 1.
     
0.706
RHOA
Ras homolog family member A.
    
 0.692
RHOB
Rho-related GTP-binding protein RhoB.
    
 0.692
RHOC
Ras homolog family member C.
    
 0.692
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.