STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000011501annotation not available (323 aa)    
Predicted Functional Partners:
ATP1A2
Uncharacterized LOC106899830.
 
  
 
0.948
ENSCPUP00000026933
annotation not available
    
 0.913
AK9
Adenylate kinase 9.
  
 
 0.847
PLN
Phospholamban.
    
 0.833
ENSCPUP00000009345
annotation not available
   
 0.816
ENSCPUP00000009346
annotation not available
   
 0.816
FXYD6
FXYD domain-containing ion transport regulator 6-like.
    
 0.780
ATP1B4
ATPase Na+/K+ transporting family member beta 4.
   
 0.770
ATP1B1
ATPase Na+/K+ transporting subunit beta 1.
   
 0.770
ATP1B2
ATPase Na+/K+ transporting subunit beta 2.
   
 0.770
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.