STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSC22D3TSC22 domain family member 3. (131 aa)    
Predicted Functional Partners:
TSC22D3-2
TSC22 domain family member 3.
 
      0.898
RAF1
Raf-1 proto-oncogene, serine/threonine kinase.
    
 0.692
LOC106900055
Serine/threonine-protein kinase Sgk3-like.
    
  0.673
LOC106886558
Serine/threonine-protein kinase Sgk3.
    
  0.673
BRAF
B-Raf proto-oncogene, serine/threonine kinase.
    
 0.628
NRBP1
Nuclear receptor binding protein 1.
    
 
 0.601
SGK1
Serum/glucocorticoid regulated kinase 1.
   
 0.594
SGK2
Serum/glucocorticoid regulated kinase 2.
   
 0.587
RPS6KB1
Ribosomal protein S6 kinase B1.
    
 0.544
KSR2
Kinase suppressor of ras 2.
    
  0.510
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.