STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000011680annotation not available (375 aa)    
Predicted Functional Partners:
CUL3
Cullin 3.
    
 0.643
CUL1
Cullin 1.
    
 0.564
TFAP2D
Transcription factor AP-2 delta.
   
 0.541
TFAP2A
Transcription factor AP-2 alpha.
   
 0.529
TFAP2C
Transcription factor AP-2 gamma.
   
 0.529
KIAA1958
KIAA1958 ortholog.
    
 0.529
TFAP2B
Transcription factor AP-2 beta.
   
 0.529
TFAP2E
Transcription factor AP-2 epsilon.
   
 0.529
KCTD2
Potassium channel tetramerization domain containing 2.
    
 
0.512
UBE2I
Ubiquitin conjugating enzyme E2 I.
    
 
 0.509
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.