STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DOCK4Dedicator of cytokinesis 4. (1948 aa)    
Predicted Functional Partners:
RPS28
Ribosomal protein S28.
  
 0.997
ENSCPUP00000002191
annotation not available
  
 0.997
RPL30
Ribosomal protein L30.
   
 0.997
RPL6
Ribosomal protein L6.
  
 0.997
RPL31
Ribosomal protein L31.
  
 0.997
RPL24
Ribosomal protein L24.
  
 0.997
RPL18A
Ribosomal protein L18a.
   
 0.997
RPS6
Ribosomal protein S6.
  
 0.997
RPL19
Ribosomal protein L19.
   
 0.997
RPL8
Ribosomal protein L8.
  
 0.997
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.