STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106888376Fatty acyl-CoA hydrolase precursor, medium chain-like. (574 aa)    
Predicted Functional Partners:
CYB5R4
Cytochrome b5 reductase 4.
     
 0.810
GUSB
Glucuronidase beta.
   
 0.809
ENSCPUP00000012322
annotation not available
    
  0.793
LOC106888319
Arylamine N-acetyltransferase, pineal gland isozyme NAT-10.
    
  0.740
ENSCPUP00000024514
annotation not available
     
 0.730
UTP20
UTP20 small subunit processome component.
   
 0.717
LPO
Eosinophil peroxidase-like.
    
 0.715
ENSCPUP00000018198
annotation not available
    
 0.715
LOC106895939
UDP-glucuronosyltransferase 1-1-like.
     
 0.706
ENSCPUP00000024511
annotation not available
     
 0.706
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.