STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RECQL4RecQ like helicase 4. (809 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
   
 0.999
EXO1
Exonuclease 1.
  
 0.990
TOP3A
DNA topoisomerase III alpha.
  
 0.990
RPA1
Replication protein A1.
   
 0.987
RAD51
RAD51 recombinase.
  
 0.981
RMI1
RecQ mediated genome instability 1.
   
 0.963
MLH1
mutL homolog 1.
  
 0.957
FBH1
F-box DNA helicase 1.
  
 0.954
ATR
ATR serine/threonine kinase.
   
 0.953
CHTF18
Chromosome transmission fidelity factor 18.
   
 
 0.953
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.