STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPAA1Glycosylphosphatidylinositol anchor attachment 1. (476 aa)    
Predicted Functional Partners:
PIGK
Phosphatidylinositol glycan anchor biosynthesis class K.
    
 0.999
PIGT
Phosphatidylinositol glycan anchor biosynthesis class T.
   
 0.999
PIGS
Phosphatidylinositol glycan anchor biosynthesis class S.
   
 0.999
PIGU
Phosphatidylinositol glycan anchor biosynthesis class U.
   
 0.998
PIGO
Phosphatidylinositol glycan anchor biosynthesis class O.
    
 0.938
PGAP1
post-GPI attachment to proteins inositol deacylase 1.
    
 0.936
PIGF
Phosphatidylinositol glycan anchor biosynthesis class F.
     
 0.865
PIGV
Phosphatidylinositol glycan anchor biosynthesis class V.
   
 
 0.704
PIGG
Phosphatidylinositol glycan anchor biosynthesis class G.
    
 0.683
PIGB
Phosphatidylinositol glycan anchor biosynthesis class B.
    
 
 0.643
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.