STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BNIP5BCL2 interacting protein 5. (417 aa)    
Predicted Functional Partners:
BECN1
Beclin 1.
    
 0.868
BCL2L11
BCL2 like 11.
    
 0.847
BID
BH3 interacting domain death agonist.
    
 0.842
APAF1
Apoptotic peptidase activating factor 1.
    
 0.791
PINK1
PTEN induced kinase 1.
    
 0.712
PRKN
Parkin RBR E3 ubiquitin protein ligase.
    
 0.704
CST3
Cystatin-like.
    
 0.655
ENSCPUP00000008336
annotation not available
    
 0.655
CSTB
cystatin-B-like.
    
 0.655
TPX2
TPX2 microtubule nucleation factor.
    
 0.655
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.