STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFTRCF transmembrane conductance regulator. (1403 aa)    
Predicted Functional Partners:
SLC9A3R1
SLC9A3 regulator 1.
   
 0.964
SLC9A3R2
SLC9A3 regulator 2.
   
 0.952
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
 
 
 0.895
PRKAA1
Protein kinase AMP-activated catalytic subunit alpha 1.
    
 0.891
VCP
Valosin containing protein.
   
 0.888
GOPC
Golgi associated PDZ and coiled-coil motif containing.
   
 0.888
PRKAA2
Protein kinase AMP-activated catalytic subunit alpha 2.
    
 0.881
TJP1
Tight junction protein 1.
     
 0.868
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
   
 0.861
PRKAB1
Protein kinase AMP-activated non-catalytic subunit beta 1.
   
 0.857
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.