STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUTCcutC copper transporter. (251 aa)    
Predicted Functional Partners:
H6PD
Hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase.
  
  
 0.614
CUTA
cutA divalent cation tolerance homolog.
      
 0.609
YBEY
ybeY metalloendoribonuclease.
      
 0.599
ATOX1
Antioxidant 1 copper chaperone.
      
 0.592
OCA2
OCA2 melanosomal transmembrane protein.
      
 0.536
TPI1
Triosephosphate isomerase 1.
      
 0.523
GUF1
GUF1 homolog, GTPase.
     
 0.522
OTUD3
OTU deubiquitinase 3.
     
 0.522
MAT1A
Methionine adenosyltransferase 1A.
  
    0.514
LOC106897493
S-adenosylmethionine synthase isoform type-2-like.
  
    0.514
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.