STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFRP5Secreted frizzled-related protein 5-like. (312 aa)    
Predicted Functional Partners:
WNT5A
Wnt family member 5A.
    
 0.921
WNT7B
Wnt family member 7B.
  
 
 0.915
WNT1
Wnt family member 1.
    
 0.913
WNT8B
Wnt family member 8B.
    
 0.907
LOC106895449
Protein Wnt-11b-like.
    
 0.903
WNT6
Wnt family member 6.
    
 0.902
WNT11
Wnt family member 11.
    
 0.902
WNT5B
Wnt family member 5B.
    
 0.901
WNT16
Wnt family member 16.
    
 0.899
WNT3A
Wnt family member 3A.
    
 0.898
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.