STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEBLNebulette. (937 aa)    
Predicted Functional Partners:
ACTN2
Actinin alpha 2.
   
 0.502
TNNI1
Troponin I1, slow skeletal type.
   
 0.492
TNNI2
Troponin I2, fast skeletal type.
   
  0.490
EZR
Ezrin.
   
 
 0.478
TMOD1
Tropomodulin 1.
   
 0.473
TMOD4
Tropomodulin 4.
   
 0.473
LOC106898583
Alpha-actinin-4-like.
   
 0.472
ENSCPUP00000000442
annotation not available
   
 0.472
ACTN1
Actinin alpha 1.
   
 0.472
ENSCPUP00000003641
annotation not available
    
 
 0.471
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.