STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARHGAP19Rho GTPase activating protein 19. (500 aa)    
Predicted Functional Partners:
BCR
BCR activator of RhoGEF and GTPase.
   
 0.563
ABR
ABR activator of RhoGEF and GTPase.
   
0.563
NCK2
NCK adaptor protein 2.
    
  0.559
RHOA
Ras homolog family member A.
    
 0.555
RHOB
Rho-related GTP-binding protein RhoB.
    
 0.555
RHOC
Ras homolog family member C.
    
 0.555
LOC106894005
Ras-related C3 botulinum toxin substrate 3.
    
 0.550
LOC106893988
Ras-related C3 botulinum toxin substrate 3.
    
 0.550
RHOJ
Ras homolog family member J.
    
 0.550
ENSCPUP00000001946
annotation not available
    
 0.550
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.