STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLDN4Claudin 4. (209 aa)    
Predicted Functional Partners:
TJP1
Tight junction protein 1.
   
 0.923
TJP3
Tight junction protein 3.
   
 0.913
ENSCPUP00000001793
annotation not available
   
 0.885
CLDN5
Claudin 5.
  
 
0.885
CLDN1
Claudin 1.
  
0.873
CLDN16
Claudin 16.
 
  
0.860
LOC106890851
Claudin-16-like.
 
  
 0.856
CLDN19
Claudin 19.
  
0.853
CLDN8
Claudin-8-like.
  
 
0.846
CLDN10
Claudin 10.
     
0.841
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.