STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPZA1Capping actin protein of muscle Z-line subunit alpha 1. (269 aa)    
Predicted Functional Partners:
CAPZB
Capping actin protein of muscle Z-line subunit beta.
   
 0.999
CAPZA2
Capping actin protein of muscle Z-line subunit alpha 2.
  
0.993
DCTN2
Dynactin subunit 2.
   
 0.987
MTPN
Myotrophin.
    
 0.987
DCTN1
Dynactin subunit 1.
    
 0.986
S100B
S100 calcium binding protein B.
   
 0.983
DCTN4
Dynactin subunit 4.
   
 0.980
ACTR1A
Actin related protein 1A.
   
 0.972
DCTN5
Dynactin subunit 5.
    
 0.969
ACTR10
Actin related protein 10.
   
 0.967
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.