STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106896382Dual specificity protein phosphatase 13 isoform A-like. (192 aa)    
Predicted Functional Partners:
INPPL1
Inositol polyphosphate phosphatase like 1.
   
 
 0.675
VRK3
VRK serine/threonine kinase 3.
    
 0.634
MAGI3
Membrane associated guanylate kinase, WW and PDZ domain containing 3.
    
 0.629
MAPK1
Mitogen-activated protein kinase 1.
   
 0.624
MAPK7
Mitogen-activated protein kinase 7.
   
 0.624
MAPK9
Mitogen-activated protein kinase 9.
   
 0.611
MAPK8
Mitogen-activated protein kinase 8.
   
 0.611
MAPK10
Mitogen-activated protein kinase 10.
   
 0.611
MAPK11
Mitogen-activated protein kinase 11.
   
 0.604
MAPK12
Mitogen-activated protein kinase 12.
   
 0.604
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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