STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLYBLCitrate lyase beta like. (331 aa)    
Predicted Functional Partners:
BAG3
BCL2 associated athanogene 3.
   
 0.845
HSPA9
Heat shock protein family A (Hsp70) member 9.
  
 0.736
HSPA5
Heat shock protein family A (Hsp70) member 5.
  
 0.734
HSPA4
Heat shock protein family A (Hsp70) member 4.
  
 0.728
HSPA4L
Heat shock protein family A (Hsp70) member 4 like.
  
 0.728
HSPH1
Heat shock protein family H (Hsp110) member 1.
  
 0.728
HYOU1
Hypoxia up-regulated 1.
  
 0.723
ENSCPUP00000001164
annotation not available
  
 0.716
HSPA14
Heat shock protein family A (Hsp70) member 14.
  
 0.716
LOC106901090
Heat shock 70 kDa protein 14-like.
  
 0.716
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.