STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVL1Dishevelled segment polarity protein 1. (676 aa)    
Predicted Functional Partners:
GAS7
Growth arrest specific 7.
    
 0.975
NKD1
NKD inhibitor of WNT signaling pathway 1.
    
 0.962
AXIN1
Axin-1.
   
 0.962
AXIN2
Axin 2.
   
 0.962
VANGL2
VANGL planar cell polarity protein 2.
    
 0.959
VANGL1
VANGL planar cell polarity protein 1.
    
 0.959
PRICKLE2
Prickle planar cell polarity protein 2.
    
 0.934
PRICKLE1
Prickle planar cell polarity protein 1.
    
 0.931
FZD4
Frizzled class receptor 4.
   
 0.920
FZD3
Frizzled class receptor 3.
    
 0.920
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.