STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CFAP20Cilia and flagella associated protein 20. (226 aa)    
Predicted Functional Partners:
ENSCPUP00000015514
annotation not available
    
   0.858
TBC1D32
TBC1 domain family member 32.
    
 
 0.809
PACRG
Parkin coregulated.
    
 
 0.806
EFHC1
EF-hand domain containing 1.
    
 
 0.801
EFHC2
EF-hand domain containing 2.
    
 
 0.801
ENKUR
Enkurin, TRPC channel interacting protein.
    
 
 0.800
ARL2BP
ADP-ribosylation factor-like protein 2-binding protein.
    
 
 0.790
PACRGL
Parkin coregulated like.
    
 
 0.778
CFAP45
Cilia and flagella associated protein 45.
    
 
 0.768
RIBC2
RIB43A domain with coiled-coils 2.
    
 
 0.757
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.