STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000015465annotation not available (132 aa)    
Predicted Functional Partners:
AK9
Adenylate kinase 9.
   
 0.888
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.870
ENSCPUP00000016887
annotation not available
    
 0.870
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
   
 0.841
GRIN2B
Glutamate ionotropic receptor NMDA type subunit 2B.
    
 0.822
GRIN2A
Glutamate ionotropic receptor NMDA type subunit 2A.
    
 0.815
DLGAP1
DLG associated protein 1.
    
 0.813
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
    
 0.796
SHANK3
SH3 and multiple ankyrin repeat domains 3.
   
 0.765
LLGL2
LLGL scribble cell polarity complex component 2.
    
 0.764
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.