STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HYDINHYDIN axonemal central pair apparatus protein. (4938 aa)    
Predicted Functional Partners:
GAK
Cyclin G associated kinase.
   
 0.618
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.609
KDM6A
Lysine demethylase 6A.
   
 0.588
MARS1
methionyl-tRNA synthetase 1.
   
 0.581
ECI2
enoyl-CoA delta isomerase 2.
    
  0.567
KATNAL2
Katanin catalytic subunit A1 like 2.
   
 0.548
IFT22
Intraflagellar transport 22.
    
 0.540
IFT81
Intraflagellar transport 81.
    
 0.530
RNF146
Ring finger protein 146.
    
  0.527
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
  0.524
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.