STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
URI1URI1 prefoldin like chaperone. (479 aa)    
Predicted Functional Partners:
POLR2E
RNA polymerase II subunit E.
    
 0.991
RUVBL1
RuvB like AAA ATPase 1.
    
 0.985
WDR92
WD repeat domain 92.
    
 0.983
RPAP3
RNA polymerase II associated protein 3.
    
 0.982
RUVBL2
ruvB-like 2.
    
 0.981
PDRG1
P53 and DNA damage regulated 1.
    
 0.979
PIH1D2
PIH1 domain containing 2.
    
 0.971
INO80B
INO80 complex subunit B.
    
 0.912
ENSCPUP00000005646
annotation not available
    
  0.667
POLR1D
DNA-directed RNA polymerases I and III subunit RPAC2-like.
   
   0.657
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.