STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZER1Zyg-11 related cell cycle regulator. (766 aa)    
Predicted Functional Partners:
CUL2
Cullin 2.
    
 0.987
ELOC
Elongin C.
    
 0.966
ELOB
Elongin B.
    
 0.964
ENSCPUP00000027903
annotation not available
     
 0.961
RBX1
Ring-box 1.
     
 0.946
ZYG11A
Protein zyg-11 homolog B.
     
0.941
ARIH1
Ariadne RBR E3 ubiquitin protein ligase 1.
   
 0.937
FEM1B
Fem-1 homolog B.
     
 0.927
KLHDC3
Kelch domain containing 3.
     
 0.926
KLHDC10
Kelch domain containing 10.
     
 0.926
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.