STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC8ALeucine rich repeat containing 8 VRAC subunit A. (810 aa)    
Predicted Functional Partners:
LRRC8C
Leucine rich repeat containing 8 VRAC subunit C.
  
 
0.982
ENSCPUP00000000773
annotation not available
    
  0.837
LRRC8B
Leucine rich repeat containing 8 VRAC subunit B.
  
 
0.818
ADGRL2
Adhesion G protein-coupled receptor L2.
    
  0.773
ADGRL3
Adhesion G protein-coupled receptor L3.
    
  0.773
LRRC8D
Leucine rich repeat containing 8 VRAC subunit D.
  
 
0.744
NTNG1
Netrin G1.
    
 0.699
MET
MET proto-oncogene, receptor tyrosine kinase.
   
 0.593
MST1R
Macrophage stimulating 1 receptor.
   
 0.593
CASK
Calcium/calmodulin dependent serine protein kinase.
    
  0.587
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.