STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAJC12DnaJ heat shock protein family (Hsp40) member C12. (262 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5 like.
    
 
 0.724
DCTN2
Dynactin subunit 2.
    
 0.723
DCTN4
Dynactin subunit 4.
    
 0.714
DCTN6
Dynactin subunit 6.
    
 0.651
DCTN5
Dynactin subunit 5.
    
 0.649
CAPZB
Capping actin protein of muscle Z-line subunit beta.
    
  0.602
GAK
Cyclin G associated kinase.
    
 
 0.570
GCHFR
GTP cyclohydrolase I feedback regulator.
      
 0.529
DNAJC1
DnaJ heat shock protein family (Hsp40) member C1.
    
 
 0.519
PAH
Phenylalanine hydroxylase.
    
 
 0.507
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.