STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ST6GALNAC6ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6. (296 aa)    
Predicted Functional Partners:
ST8SIA5
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5.
     
 0.868
ST3GAL1
ST3 beta-galactoside alpha-2,3-sialyltransferase 1.
  
  
0.862
ST3GAL2
ST3 beta-galactoside alpha-2,3-sialyltransferase 2.
  
  
0.860
LOC106899382
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2-like.
  
  
0.860
ST6GALNAC5
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5-like.
  
  
 
0.837
ST8SIA6
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6.
     
 0.821
ST6GALNAC4
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4.
  
  
 
0.786
ENSCPUP00000003380
annotation not available
   
    0.675
SELENOO
Selenoprotein O.
   
    0.675
RHOV
Ras homolog family member V.
   
    0.675
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.