STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCAS3BCAS3 microtubule associated cell migration factor. (851 aa)    
Predicted Functional Partners:
C16orf70
Chromosome unknown open reading frame, human C16orf70.
   
 
 0.878
WIPI2
WD repeat domain phosphoinositide-interacting protein 2.
   
 
 0.753
WIPI1
WD repeat domain, phosphoinositide interacting 1.
   
 
 0.661
SERPINC1
Serpin family C member 1.
      
 0.535
FHAD1
Forkhead associated phosphopeptide binding domain 1.
      
 0.481
SEL1L3
SEL1L family member 3.
   
  
 0.473
TLR4
Toll like receptor 4.
      
 0.457
WDR45B
WD repeat domain 45B.
   
  
 0.446
ZFYVE1
Zinc finger FYVE-type containing 1.
   
  
 0.441
INS
Insulin.
      
 0.439
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.