STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C8AComplement C8 alpha chain. (599 aa)    
Predicted Functional Partners:
C9
Complement C9.
   
 
0.997
C5
Complement C5.
   
 0.996
C8G
Complement C8 gamma chain.
   
 0.992
C6
Complement C6.
   
 
0.977
C8B
Complement C8 beta chain.
  
0.944
SERPINC1
Serpin family C member 1.
   
  
 0.687
LOC106896732
Complement C4-B-like.
   
 0.656
C3
Complement C3-like.
   
 0.656
LOC106902556
Complement C4-like.
   
 0.656
TNFRSF13C
TNF receptor superfamily member 13C.
    
 0.611
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.