STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HSPB11Heat shock protein family B (small) member 11. (168 aa)    
Predicted Functional Partners:
IFT27
Intraflagellar transport 27.
    
 0.991
ANAPC5
Anaphase promoting complex subunit 5.
   
 0.989
ANAPC1
Anaphase promoting complex subunit 1.
    
 0.988
IFT22
Intraflagellar transport 22.
   
 0.988
CDC16
Cell division cycle 16.
    
 0.988
FAM89A
Family with sequence similarity 89 member A.
    
 0.988
CDC27
Cell division cycle 27.
    
 0.988
ANAPC2
Anaphase promoting complex subunit 2.
    
 0.988
ANAPC4
Anaphase promoting complex subunit 4.
    
 0.988
ANAPC7
Anaphase promoting complex subunit 7.
    
 0.983
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.