STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERO1BEndoplasmic reticulum oxidoreductase 1 beta. (467 aa)    
Predicted Functional Partners:
P4HB
Prolyl 4-hydroxylase subunit beta.
   
 0.946
PDIA4
Protein disulfide isomerase family A member 4.
   
 0.946
PDIA2
Protein disulfide isomerase family A member 2.
   
 0.927
PDIA6
Protein disulfide isomerase family A member 6.
   
 0.925
TXNDC5
Thioredoxin domain containing 5.
    
 0.923
ERO1A
Endoplasmic reticulum oxidoreductase 1 alpha.
  
 
 
0.895
PDIA3
Protein disulfide isomerase family A member 3.
   
 0.894
ERP29
Endoplasmic reticulum protein 29.
     
 0.851
ERP44
Endoplasmic reticulum protein 44.
    
 0.805
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
   
 0.774
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.