STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRUNE1Prune exopolyphosphatase 1. (395 aa)    
Predicted Functional Partners:
ENSCPUP00000019119
annotation not available
  
 
 0.874
PRUNE2
Prune homolog 2 with BCH domain.
     
0.858
ATP5F1D
ATP synthase F1 subunit delta.
    
 0.822
ATP5F1C
ATP synthase F1 subunit gamma.
    
 0.822
ATP5F1A
ATP synthase F1 subunit alpha.
  
 
 0.789
ATP5PO
ATP synthase peripheral stalk subunit OSCP.
  
 
 0.788
ATP6V1E1
ATPase H+ transporting V1 subunit E1.
    
  0.777
BNIP2
BCL2 interacting protein 2.
 
    
 0.758
PPA2
Inorganic pyrophosphatase 2.
     
 0.749
PPA1
Inorganic pyrophosphatase 1.
     
 0.749
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.