STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1orf198Chromosome unknown open reading frame, human C1orf198. (335 aa)    
Predicted Functional Partners:
UQCRB
Cytochrome b-c1 complex subunit 7.
   
 0.999
LOC106902292
Cytochrome c oxidase subunit 6C.
   
 0.999
UQCR10
Cytochrome b-c1 complex subunit 9.
   
 0.999
UQCRQ
Cytochrome b-c1 complex subunit 8.
   
 0.999
LOC106892097
Cytochrome b-c1 complex subunit 10.
   
 0.999
COX4I1
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial.
   
 0.999
COX6A1
Cytochrome c oxidase subunit 6A1, mitochondrial.
   
 0.999
UQCRFS1
Cytochrome b-c1 complex subunit Rieske, mitochondrial.
   
 0.999
COX5A
Cytochrome c oxidase subunit 5A, mitochondrial.
   
 0.999
LOC106886384
Cytochrome b-c1 complex subunit 6, mitochondrial.
   
 0.999
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.