STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000017599annotation not available (95 aa)    
Predicted Functional Partners:
CALML4
Calmodulin like 4.
   
 0.813
CAMK1G
Calcium/calmodulin dependent protein kinase IG.
    
  0.769
ATF4
Activating transcription factor 4.
   
  0.765
ATF1
Activating transcription factor 1.
    
 0.753
CREB1
cAMP responsive element binding protein 1.
    
 0.753
CREB3L1
cAMP responsive element binding protein 3 like 1.
    
 0.731
CREB3L2
cAMP responsive element binding protein 3 like 2.
    
 0.724
CREB3L3
cAMP responsive element binding protein 3 like 3.
    
  0.720
CREB3
cAMP responsive element binding protein 3.
    
  0.720
ATF6
Activating transcription factor 6.
   
 
  0.715
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.