STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STARD6StAR related lipid transfer domain containing 6. (210 aa)    
Predicted Functional Partners:
VAPA
VAMP associated protein A.
    
 0.679
VAPB
VAMP associated protein B and C.
    
 0.679
MOSPD1
Motile sperm domain containing 1.
    
 0.679
STAR
Steroidogenic acute regulatory protein.
     
0.582
CPLX4
Complexin 4.
      
 0.535
CCDC68
Coiled-coil domain containing 68.
      
 0.531
PCTP
Phosphatidylcholine transfer protein.
      
 0.524
STARD10
StAR related lipid transfer domain containing 10.
      
 0.437
STARD3
StAR related lipid transfer domain containing 3.
     
0.427
LOC106895560
Adrenodoxin, mitochondrial-like.
   
 
 0.420
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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