STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCAN1Regulator of calcineurin 1. (194 aa)    
Predicted Functional Partners:
PPP3R1
Protein phosphatase 3 regulatory subunit B, alpha.
    
 
 0.748
PPP3CC
Protein phosphatase 3 catalytic subunit gamma.
    
 
 0.718
PPP3CB
Protein phosphatase 3 catalytic subunit beta.
    
 
 0.718
PPP3CA
Protein phosphatase 3 catalytic subunit alpha.
    
 
 0.718
LOC106900882
Protein FAM122A-like.
    
   0.586
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
    
 
 0.559
TESC
Tescalcin.
    
 
 0.554
CIB1
Calcium and integrin binding 1.
    
 
 0.554
CHP1
Calcineurin like EF-hand protein 1.
    
 
 0.554
PPP2CA
Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform.
    
 
 0.544
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.