STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCPUP00000018139annotation not available (1691 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.999
RIMS1
Regulating synaptic membrane exocytosis 1.
    
 0.823
RIMS3
Regulating synaptic membrane exocytosis 3.
    
 0.823
STXBP1
Syntaxin binding protein 1.
    
 0.797
SNAP25
Synaptosome associated protein 25.
   
 0.761
RIMS4
Regulating synaptic membrane exocytosis 4.
    
 0.749
STXBP3
Syntaxin binding protein 3.
    
 0.740
RIMBP2
RIMS binding protein 2.
   
 0.726
TSPOAP1
TSPO associated protein 1.
   
 0.726
STX3
Syntaxin 3.
    
 0.707
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.