STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAPSNReceptor associated protein of the synapse. (397 aa)    
Predicted Functional Partners:
CHRND
Cholinergic receptor nicotinic delta subunit.
   
 
 0.729
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
   
 
 0.624
MUSK
Muscle associated receptor tyrosine kinase.
   
  
 0.622
NEURL1
Neuralized E3 ubiquitin protein ligase 1.
      
 0.614
NEURL1B
Neuralized E3 ubiquitin protein ligase 1B.
      
 0.614
DAG1
Dystroglycan 1.
    
 
 0.613
DOK7
Docking protein 7.
      
 0.609
AGRN
Agrin.
      
 0.609
COLQ
Collagen like tail subunit of asymmetric acetylcholinesterase.
      
 0.517
MYO9A
Myosin IXA.
      
 0.438
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.