STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMPRSS15Transmembrane serine protease 15. (983 aa)    
Predicted Functional Partners:
MST1R
Macrophage stimulating 1 receptor.
    
 0.761
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.752
ENSCPUP00000013305
annotation not available
    
 0.641
ENSCPUP00000000773
annotation not available
    
  0.633
AGRN
Agrin.
    
 0.614
PTK7
Protein tyrosine kinase 7 (inactive).
    
  0.595
TFPI
Tissue factor pathway inhibitor.
    
  0.535
SPINT1
Serine peptidase inhibitor, Kunitz type 1.
    
 0.522
SPINK4
Serine peptidase inhibitor, Kazal type 4.
    
 0.521
TXN
Thioredoxin.
    
 
 0.509
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.