RPRD2 protein (Calidris pugnax) - STRING interaction network

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second shell of interactors

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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Score

RPRD2

Regulation of nuclear pre-mRNA domain containing 2. (1649 aa)

Predicted Functional Partners:

POLR2B

0.903

RPAP2

0.897

RPRD1B

0.883

LOC106887667

0.853

RPRD1A

0.828

PCF11

0.807

XRN2

0.803

FBF1

0.801

POLR2C

0.800

POLR2D

0.790

Your Current Organism:

Calidris pugnax

NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FBF1	LOC106887667	ENSCPUP00000004504	ENSCPUP00000014422	Fas binding factor 1.	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	0.814
FBF1	PCF11	ENSCPUP00000004504	ENSCPUP00000000058	Fas binding factor 1.	PCF11 cleavage and polyadenylation factor subunit.	0.773
FBF1	POLR2B	ENSCPUP00000004504	ENSCPUP00000013891	Fas binding factor 1.	RNA polymerase II subunit B.	0.922
FBF1	POLR2C	ENSCPUP00000004504	ENSCPUP00000015017	Fas binding factor 1.	RNA polymerase II subunit C.	0.817
FBF1	POLR2D	ENSCPUP00000004504	ENSCPUP00000028053	Fas binding factor 1.	RNA polymerase II subunit D.	0.806
FBF1	RPAP2	ENSCPUP00000004504	ENSCPUP00000004911	Fas binding factor 1.	RNA polymerase II associated protein 2.	0.847
FBF1	RPRD2	ENSCPUP00000004504	ENSCPUP00000018710	Fas binding factor 1.	Regulation of nuclear pre-mRNA domain containing 2.	0.801
FBF1	XRN2	ENSCPUP00000004504	ENSCPUP00000006963	Fas binding factor 1.	5'-3' exoribonuclease 2.	0.858
LOC106887667	FBF1	ENSCPUP00000014422	ENSCPUP00000004504	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	Fas binding factor 1.	0.814
LOC106887667	PCF11	ENSCPUP00000014422	ENSCPUP00000000058	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	PCF11 cleavage and polyadenylation factor subunit.	0.998
LOC106887667	POLR2B	ENSCPUP00000014422	ENSCPUP00000013891	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	RNA polymerase II subunit B.	0.904
LOC106887667	POLR2C	ENSCPUP00000014422	ENSCPUP00000015017	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	RNA polymerase II subunit C.	0.893
LOC106887667	POLR2D	ENSCPUP00000014422	ENSCPUP00000028053	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	RNA polymerase II subunit D.	0.821
LOC106887667	RPAP2	ENSCPUP00000014422	ENSCPUP00000004911	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	RNA polymerase II associated protein 2.	0.848
LOC106887667	RPRD1A	ENSCPUP00000014422	ENSCPUP00000007260	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	Regulation of nuclear pre-mRNA domain containing 1A.	0.814
LOC106887667	RPRD1B	ENSCPUP00000014422	ENSCPUP00000008090	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	Regulation of nuclear pre-mRNA domain containing 1B.	0.814
LOC106887667	RPRD2	ENSCPUP00000014422	ENSCPUP00000018710	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	Regulation of nuclear pre-mRNA domain containing 2.	0.853
LOC106887667	XRN2	ENSCPUP00000014422	ENSCPUP00000006963	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	5'-3' exoribonuclease 2.	0.553
PCF11	FBF1	ENSCPUP00000000058	ENSCPUP00000004504	PCF11 cleavage and polyadenylation factor subunit.	Fas binding factor 1.	0.773
PCF11	LOC106887667	ENSCPUP00000000058	ENSCPUP00000014422	PCF11 cleavage and polyadenylation factor subunit.	RNA polymerase II subunit A C-terminal domain phosphatase SSU72.	0.998