STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTG2BTG anti-proliferation factor 2. (167 aa)    
Predicted Functional Partners:
CNOT7
CCR4-NOT transcription complex subunit 7.
    
 0.890
BTG4
BTG anti-proliferation factor 4.
  
  
 
0.847
BTG1
BTG anti-proliferation factor 1.
  
  
 
0.839
CNOT8
CCR4-NOT transcription complex subunit 8.
    
 0.820
TOB1
Transducer of ERBB2, 1.
  
  
 
0.787
TOB2
Transducer of ERBB2, 2.
  
  
 
0.785
CNOT1
CCR4-NOT transcription complex subunit 1.
    
 0.777
CNOT11
CCR4-NOT transcription complex subunit 11.
    
 0.756
CNOT10
CCR4-NOT transcription complex subunit 10.
    
 0.745
CNOT9
CCR4-NOT transcription complex subunit 9.
    
  0.735
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.