STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDADC1Cytidine and dCMP deaminase domain containing 1. (523 aa)    
Predicted Functional Partners:
TYMS
Thymidylate synthetase.
  
 
 0.889
TK1
Thymidine kinase 1.
  
 
 0.883
EPHX2
Epoxide hydrolase 2.
  
 
  0.871
AK9
Adenylate kinase 9.
  
 0.851
DHFR
Dihydrofolate reductase.
  
 
 0.839
CMPK2
Cytidine/uridine monophosphate kinase 2.
    
 0.767
DTYMK
Deoxythymidylate kinase.
    
 0.767
NUDT15
Nudix hydrolase 15.
    
 0.760
UPP2
Uridine phosphorylase 2.
     
 0.736
UPP1
Uridine phosphorylase 1.
     
 0.736
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.