STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SETDB2SET domain bifurcated histone lysine methyltransferase 2. (718 aa)    
Predicted Functional Partners:
ATF7IP
Activating transcription factor 7 interacting protein.
   
 0.945
SUV39H2
Suppressor of variegation 3-9 homolog 2.
    
0.890
PRDM4
PR/SET domain 4.
   
 0.872
DOT1L
DOT1 like histone lysine methyltransferase.
    
 0.871
PRDM5
PR/SET domain 5.
   
 0.866
ARL14EP
ARL14 effector protein.
    
 
 0.866
LOC106890714
Histone-lysine N-methyltransferase SETMAR.
    
0.853
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
    
  0.850
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
    
  0.850
KMT2E
Lysine methyltransferase 2E.
    
 0.849
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.