STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFYVE16Zinc finger FYVE-type containing 16. (1525 aa)    
Predicted Functional Partners:
SMAD3
SMAD family member 3.
    
 0.919
SMAD2
SMAD family member 2.
    
 0.919
SMAD4
SMAD family member 4.
    
 0.832
SMAD5
SMAD family member 5.
    
 0.725
SMAD1
SMAD family member 1.
    
 0.725
SMAD9
SMAD family member 9.
    
 0.725
SMAD6
SMAD family member 6.
    
 0.710
SMAD7
SMAD family member 7.
    
 0.710
PTPN23
Protein tyrosine phosphatase non-receptor type 23.
   
 
 0.699
FAM151B
Family with sequence similarity 151 member B.
 
    
 0.690
Your Current Organism:
Calidris pugnax
NCBI taxonomy Id: 198806
Other names: C. pugnax, Machetes pugnax, Pavoncella pugnax, Philomachus pugnax, ruff
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.